bioinformatics challenges at the interface of biology and computer science mind the gap

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Bioinformatics Challenges At The Interface Of Biology And Computer Science

Author : Teresa K. Attwood
ISBN : 9781119243441
Genre : Science
File Size : 24. 90 MB
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This innovative book provides a completely fresh exploration of bioinformatics, investigating its complex interrelationship with biology and computer science. It approaches bioinformatics from a unique perspective, highlighting interdisciplinary gaps that often trap the unwary. The book considers how the need for biological databases drove the evolution of bioinformatics; it reviews bioinformatics basics (including database formats, data-types and current analysis methods), and examines key topics in computer science (including data-structures, identifiers and algorithms), reflecting on their use and abuse in bioinformatics. Bringing these disciplines together, this book is an essential read for those who wish to better understand the challenges for bioinformatics at the interface of biology and computer science, and how to bridge the gaps. It will be an invaluable resource for advanced undergraduate and postgraduate students, and for lecturers, researchers and professionals with an interest in this fascinating, fast-moving discipline and the knotty problems that surround it.

Bioinformatics Computing

Author : Bryan P. Bergeron
ISBN : 0131008250
Genre : Computers
File Size : 84. 82 MB
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Comprehensive and concise, this handbook has chapters on computing visualization, large database designs, advanced pattern matching and other key bioinformatics techniques. It is a practical guide to computing in the growing field of Bioinformatics--the study of how information is represented and transmitted in biological systems, starting at the molecular level.

Developing Bioinformatics Computer Skills

Author : Cynthia Gibas
ISBN : 1565926641
Genre : Computers
File Size : 22. 5 MB
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Offers a structured approach to biological data and the computer tools needed to analyze it, covering UNIX, databases, computation, Perl, data mining, data visualization, and tailoring software to suit specific research needs.

The Fabric Of Interface

Author : Stephen Monteiro
ISBN : 9780262037006
Genre : Design
File Size : 52. 1 MB
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Woven memory -- Image fabric -- Piecework -- Domestic disturbances

Essential Bioinformatics

Author : Jin Xiong
ISBN : 9781139450621
Genre : Science
File Size : 79. 6 MB
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Essential Bioinformatics is a concise yet comprehensive textbook of bioinformatics, which provides a broad introduction to the entire field. Written specifically for a life science audience, the basics of bioinformatics are explained, followed by discussions of the state-of-the-art computational tools available to solve biological research problems. All key areas of bioinformatics are covered including biological databases, sequence alignment, genes and promoter prediction, molecular phylogenetics, structural bioinformatics, genomics and proteomics. The book emphasizes how computational methods work and compares the strengths and weaknesses of different methods. This balanced yet easily accessible text will be invaluable to students who do not have sophisticated computational backgrounds. Technical details of computational algorithms are explained with a minimum use of mathematical formulae; graphical illustrations are used in their place to aid understanding. The effective synthesis of existing literature as well as in-depth and up-to-date coverage of all key topics in bioinformatics make this an ideal textbook for all bioinformatics courses taken by life science students and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.

Bioinformatics An Introduction

Author : Jeremy J. Ramsden
ISBN : 9781402029509
Genre : Science
File Size : 83. 27 MB
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An Introduction to Bioinformatics is intended to be a complete study companion for the advanced undergraduate or beginning graduate student. It is self-contained in the sense that whatever the starting point may be, the reader will gain insight into bioinformatics. Underlying the work is the belief that bioinformatics is a kind of metaphoric lens through which the entire field of biology can be brought into focus, admittedly as yet imperfect, and understood in a unified way. Reflecting the highly incomplete present state of the field, emphasis is placed on the underlying fundamentals and acquisitions of a broad and comprehensive grasp of the field as a whole. Bioinformatics is interpreted as the application of information science to biology, in which it plays a fundamental and all-pervasive role. This interpretation enables a remarkably unified view of the entire field of biology to be taken and hence offers an excellent entry point into the life sciences for those for whom biology is unfamiliar.

Data Mining For Bioinformatics

Author : Sumeet Dua
ISBN : 9780849328015
Genre : Computers
File Size : 56. 15 MB
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Covering theory, algorithms, and methodologies, as well as data mining technologies, Data Mining for Bioinformatics provides a comprehensive discussion of data-intensive computations used in data mining with applications in bioinformatics. It supplies a broad, yet in-depth, overview of the application domains of data mining for bioinformatics to help readers from both biology and computer science backgrounds gain an enhanced understanding of this cross-disciplinary field. The book offers authoritative coverage of data mining techniques, technologies, and frameworks used for storing, analyzing, and extracting knowledge from large databases in the bioinformatics domains, including genomics and proteomics. It begins by describing the evolution of bioinformatics and highlighting the challenges that can be addressed using data mining techniques. Introducing the various data mining techniques that can be employed in biological databases, the text is organized into four sections: Supplies a complete overview of the evolution of the field and its intersection with computational learning Describes the role of data mining in analyzing large biological databases—explaining the breath of the various feature selection and feature extraction techniques that data mining has to offer Focuses on concepts of unsupervised learning using clustering techniques and its application to large biological data Covers supervised learning using classification techniques most commonly used in bioinformatics—addressing the need for validation and benchmarking of inferences derived using either clustering or classification The book describes the various biological databases prominently referred to in bioinformatics and includes a detailed list of the applications of advanced clustering algorithms used in bioinformatics. Highlighting the challenges encountered during the application of classification on biological databases, it considers systems of both single and ensemble classifiers and shares effort-saving tips for model selection and performance estimation strategies.

Facilitating Interdisciplinary Research

Author : Institute of Medicine
ISBN : 0309165482
Genre : Science
File Size : 30. 53 MB
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Facilitating Interdisciplinary Research examines current interdisciplinary research efforts and recommends ways to stimulate and support such research. Advances in science and engineering increasingly require the collaboration of scholars from various fields. This shift is driven by the need to address complex problems that cut across traditional disciplines, and the capacity of new technologies to both transform existing disciplines and generate new ones. At the same time, however, interdisciplinary research can be impeded by policies on hiring, promotion, tenure, proposal review, and resource allocation that favor traditional disciplines. This report identifies steps that researchers, teachers, students, institutions, funding organizations, and disciplinary societies can take to more effectively conduct, facilitate, and evaluate interdisciplinary research programs and projects. Throughout the report key concepts are illustrated with case studies and results of the committee’s surveys of individual researchers and university provosts.

Parallel Computing For Bioinformatics And Computational Biology

Author : Albert Y. Zomaya
ISBN : 9780471756491
Genre : Computers
File Size : 51. 8 MB
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Discover how to streamline complex bioinformatics applications with parallel computing This publication enables readers to handle more complex bioinformatics applications and larger and richer data sets. As the editor clearly shows, using powerful parallel computing tools can lead to significant breakthroughs in deciphering genomes, understanding genetic disease, designing customized drug therapies, and understanding evolution. A broad range of bioinformatics applications is covered with demonstrations on how each one can be parallelized to improve performance and gain faster rates of computation. Current parallel computing techniques and technologies are examined, including distributed computing and grid computing. Readers are provided with a mixture of algorithms, experiments, and simulations that provide not only qualitative but also quantitative insights into the dynamic field of bioinformatics. Parallel Computing for Bioinformatics and Computational Biology is a contributed work that serves as a repository of case studies, collectively demonstrating how parallel computing streamlines difficult problems in bioinformatics and produces better results. Each of the chapters is authored by an established expert in the field and carefully edited to ensure a consistent approach and high standard throughout the publication. The work is organized into five parts: * Algorithms and models * Sequence analysis and microarrays * Phylogenetics * Protein folding * Platforms and enabling technologies Researchers, educators, and students in the field of bioinformatics will discover how high-performance computing can enable them to handle more complex data sets, gain deeper insights, and make new discoveries.

Ontologies For Bioinformatics

Author : Kenneth Baclawski
ISBN : 0262025914
Genre : Computers
File Size : 52. 10 MB
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Ontologies as a critical framework for the vast amounts of data in the postgenomicera: an introduction to the basic concepts and applications of ontologies and ontology languages forthe life sciences.

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