introduction to neuroimaging analysis oxford neuroimaging primers

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Introduction To Neuroimaging Analysis

Author : Mark Jenkinson
ISBN : 9780198816300
Genre : Medical
File Size : 45. 22 MB
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MRI has emerged as a powerful way of studying in-vivo brain structure and function in both healthy and disease states. Whilst new researchers may be able to call upon advice and support for acquisition from operators, radiologists and technicians, it is more challenging to obtain anunderstanding of the principles of analysing neuroimaging data. This is crucial for choosing acquisition parameters, designing and performing appropriate experiments, and correctly interpreting the results. This primer gives a general and accessible introduction to the wide array of MRI-based neuroimaging methods that are used in research. Supplemented with online datasets and examples to enable the reader to obtain hands-on experience working with real data, it provides a practical and approachableintroduction for those new to the neuroimaging field. The text also covers the fundamentals of what different MRI modalities measure, what artifacts commonly occur, the essentials of the analysis, and common "pipelines" including brain extraction, registration and segmentation. As it does not require any background knowledge beyond high-school mathematics and physics, this primer is essential reading for anyone wanting to work in neuroimaging or grasp the results coming from this rapidly expanding field.The Oxford Neuroimaging Primers are short texts aimed at new researchers or advanced undergraduates from the biological, medical or physical sciences. They are intended to provide a broad understanding of the ways in which neuroimaging data can be analyzed and how that relates to acquisition andinterpretation. Each primer has been written so that it is a stand-alone introduction to a particular area of neuroimaging, and the primers also work together to provide a comprehensive foundation for this increasingly influential field.

An Introduction To Resting State Fmri Functional Connectivity

Author : Janine Bijsterbosch
ISBN : 9780198808220
Genre :
File Size : 62. 73 MB
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Spontaneous resting-state fluctuations in neuronal activity offer insights into the inherent organization of the human brain, and may provide markers for diagnosis and treatment of mental disorders. Resting state functional magnetic resonance imaging (fMRI) can be used to investigate intrinsicfunctional connectivity networks, which are identified based on similarities in the signal measured from different brain regions.From data acquisition to interpretation of results, Introduction to Resting State fMRI Functional Connectivity discusses a wide range of approaches without requiring any previous knowledge of resting state fMRI, making it highly accessible to readers from a broad range of backgrounds.Supplemented with online datasets and examples to enable the reader to obtain hands-on experience working with real data, this primer provides a practical and approachable introduction for those new to the field of resting state fMRI.The Oxford Neuroimaging Primers are short texts aimed at new researchers or advanced undergraduates from the biological, medical or physical sciences. They are intended to provide a thorough understanding of the ways in which neuroimaging data can be analyzed and how that relates to acquisition andinterpretation. Each primer has been written so that it is a stand-alone introduction to a particular area of neuroimaging, and the primers also work together to provide a comprehensive foundation for this increasingly influential field.

Handbook Of Functional Mri Data Analysis

Author : Russell A. Poldrack
ISBN : 9781139498364
Genre : Medical
File Size : 81. 35 MB
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Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook of Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Introduction To Perfusion Quantification Using Arterial Spin Labelling

Author : Michael Chappell
ISBN : 9780192512581
Genre : Medical
File Size : 49. 70 MB
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Arterial Spin Labeling (ASL) is an increasingly popular tool to study the brain. What sets it apart from other neuroimaging methods is the combination of quantitative measurements of a physiologically well-defined process, namely perfusion, and a completely non-invasive acquisition methodology. Cerebral perfusion is a critical component to brain health, as it is the primary means to deliver nutrients to support brain function as well as clearing waste products. Hence it is a useful quantity to study in disease where changes in perfusion can indicate regions of the brain that are pathological. Likewise changes in perfusion can be indicative of greater demand for nutrients, such as might be required in response to an increase in neuronal activity. With the advent of a consensus by the ASL community on good practice and a recommendation on robust methods for ASL data collection, more and more researchers are now able to access and use ASL. Despite the technological advances, ASL remains a technique with a low signal to noise ratio. This makes the wise choice of the appropriate analysis methods more important. The aim of this primer is to equip someone new to the field of perfusion imaging and ASL with the knowledge not only to make good choices about ASL acquisition and analysis, but also to understand what choices they are making and why. Examples of analysis applied to real data are given throughout the text and instructions on how to reproduce the analyses are illustrated on the primer website. Written to provide a stand-alone introduction to perfusion qualification using ASL, this primer also works with other texts in the Oxford Neuroimaging Primers series to provide a comprehensive overview of the increasingly influential field of neuroimaging.

Fundamentals Of Brain Network Analysis

Author : Alex Fornito
ISBN : 9780124081185
Genre : Medical
File Size : 85. 5 MB
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Fundamentals of Brain Network Analysis is a comprehensive and accessible introduction to methods for unraveling the extraordinary complexity of neuronal connectivity. From the perspective of graph theory and network science, this book introduces, motivates and explains techniques for modeling brain networks as graphs of nodes connected by edges, and covers a diverse array of measures for quantifying their topological and spatial organization. It builds intuition for key concepts and methods by illustrating how they can be practically applied in diverse areas of neuroscience, ranging from the analysis of synaptic networks in the nematode worm to the characterization of large-scale human brain networks constructed with magnetic resonance imaging. This text is ideally suited to neuroscientists wanting to develop expertise in the rapidly developing field of neural connectomics, and to physical and computational scientists wanting to understand how these quantitative methods can be used to understand brain organization. Extensively illustrated throughout by graphical representations of key mathematical concepts and their practical applications to analyses of nervous systems Comprehensively covers graph theoretical analyses of structural and functional brain networks, from microscopic to macroscopic scales, using examples based on a wide variety of experimental methods in neuroscience Designed to inform and empower scientists at all levels of experience, and from any specialist background, wanting to use modern methods of network science to understand the organization of the brain

Statistical Analysis Of Fmri Data

Author : F. Gregory Ashby
ISBN : 9780262015042
Genre : Medical
File Size : 57. 20 MB
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An overview of statistical methods for analyzing data from fMRI experiments.

Oxford Textbook Of Neuroimaging

Author :
ISBN : 9780199664092
Genre : Central nervous system
File Size : 59. 42 MB
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Part of the Oxford Textbooks in Clinical Neurology series, the Oxford Textbook of Neuroimaging provides an overview of the established and latest neuroimaging methodologies, and illustrates their application to the main diseases of the brain and the spinal cord including movement disorders, headache and stroke. In addition, assessments of neuroimaging techniques in both adult and paediatric neurological conditions are included, enabling thorough examples from both age groups. This full-colour book contains 280 detailed photographs and illustrations that enable a clear understanding of each technique. Covering the newest advances, each different imagining technique is comprehensively described, providing a practical relevance and a stimulus for more in-depth readings. The print edition is supplemented with a concurrent online edition, which allows access to the full content of the textbook, contains links from the references to primary research journal articles, and provides access to figures and tables that can be downloaded by the user. Providing a balanced state-of-the-art guide to neuroimaging for neurologists and radiologists, this title will enhance understanding of the pathophysiological basis of neurological conditions and will help set the stage for future research.

Meg Eeg Primer

Author : Riitta Hari
ISBN : 9780190497798
Genre : Medical
File Size : 90. 61 MB
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Magnetoencephalography (MEG) and electroencephalography (EEG) provide complementary views to the neurodynamics of healthy and diseased human brains. Both methods are totally noninvasive and can track with millisecond temporal resolution spontaneous brain activity, evoked responses to various sensory stimuli, as well as signals associated with the performance of motor, cognitive and affective tasks. MEG records the magnetic fields, and EEG the potentials associated with the same neuronal currents, which however are differentially weighted due to the physical and physiological differences between the methods. MEG is rather selective to activity in the walls of cortical folds, whereas EEG senses currents from the cortex (and brain) more widely, making it harder to pinpoint the locations of the source currents in the brain. Another important difference between the methods is that skull and scalp dampen and smear EEG signals, but do not affect MEG. Hence, to fully understand brain function, information from MEG and EEG should be combined. Additionally, the excellent neurodynamical information these two methods provide can be merged with data from other brain-imaging methods, especially functional magnetic resonance imaging where spatial resolution is a major strength. MEG-EEG Primer is the first-ever volume to introduce and discuss MEG and EEG in a balanced manner side-by-side, starting from their physical and physiological bases and then advancing to methods of data acquisition, analysis, visualization, and interpretation. The authors pay special attention to careful experimentation, guiding readers to differentiate brain signals from various artifacts and to assure that the collected data are reliable. The book weighs the strengths and weaknesses of MEG and EEG relative to one another and to other methods used in systems, cognitive, and social neuroscience. The authors also discuss the role of MEG and EEG in the assessment of brain function in various clinical disorders. The book aims to bring members of multidisciplinary research teams onto equal footing so that they can contribute to different aspects of MEG and EEG research and to be able to participate in future developments in the field.

The Statistical Analysis Of Functional Mri Data

Author : Nicole Lazar
ISBN : 9780387781914
Genre : Medical
File Size : 23. 35 MB
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The study of brain function is one of the most fascinating pursuits of m- ern science. Functional neuroimaging is an important component of much of the current research in cognitive, clinical, and social psychology. The exci- ment of studying the brain is recognized in both the popular press and the scienti?c community. In the pages of mainstream publications, including The New York Times and Wired, readers can learn about cutting-edge research into topics such as understanding how customers react to products and - vertisements (“If your brain has a ‘buy button,’ what pushes it?”, The New York Times,October19,2004),howviewersrespondtocampaignads(“Using M. R. I. ’s to see politics on the brain,” The New York Times, April 20, 2004; “This is your brain on Hillary: Political neuroscience hits new low,” Wired, November 12,2007),howmen and womenreactto sexualstimulation (“Brain scans arouse researchers,”Wired, April 19, 2004), distinguishing lies from the truth (“Duped,” The New Yorker, July 2, 2007; “Woman convicted of child abuse hopes fMRI can prove her innocence,” Wired, November 5, 2007), and even what separates “cool” people from “nerds” (“If you secretly like Michael Bolton, we’ll know,” Wired, October 2004). Reports on pathologies such as autism, in which neuroimaging plays a large role, are also common (for - stance, a Time magazine cover story from May 6, 2002, entitled “Inside the world of autism”).

Handbook Of Neuroimaging Data Analysis

Author : Hernando Ombao
ISBN : 9781482220988
Genre : Mathematics
File Size : 71. 40 MB
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This book explores various state-of-the-art aspects behind the statistical analysis of neuroimaging data. It examines the development of novel statistical approaches to model brain data. Designed for researchers in statistics, biostatistics, computer science, cognitive science, computer engineering, biomedical engineering, applied mathematics, physics, and radiology, the book can also be used as a textbook for graduate-level courses in statistics and biostatistics or as a self-study reference for Ph.D. students in statistics, biostatistics, psychology, neuroscience, and computer science.

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