python programming for biology bioinformatics and beyond

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Python Programming For Biology

Author : Tim J. Stevens
ISBN : 9780521895835
Genre : Computers
File Size : 48. 98 MB
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This book introduces Python as a powerful tool for the investigation of problems in computational biology, for novices and experienced programmers alike.

Foundations Of Theoretical Approaches In Systems Biology

Author : Alberto Marin-Sanguino
ISBN : 9782889456833
Genre :
File Size : 71. 46 MB
Format : PDF
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If biology in the 20th century was characterized by an explosion of new technologies and experimental methods, that of the 21st has seen an equally exuberant proliferation of mathematical and computational methods that attempt to systematize and explain the abundance of available data. As we live through the consolidation of a new paradigm where experimental data goes hand in hand with computational analysis, we contemplate the challenge of fusing these two aspects of the new biology into a consistent theoretical framework. Whether systems biology will survive as a field or be washed away by the tides of future fads will ultimately depend on its success to achieve this type of synthesis. The famous quote attributed to Kurt Lewin comes to mind: "there is nothing more practical than a good theory". This book presents a wide assortment of articles on systems biology in an attempt to capture the variety of current methods in systems biology and show how they can help to find answers to the challenges of modern biology.

Bioinformatics Programming Using Python

Author : Mitchell L Model
ISBN : 1449382908
Genre : Computers
File Size : 87. 18 MB
Format : PDF
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Powerful, flexible, and easy to use, Python is an ideal language for building software tools and applications for life science research and development. This unique book shows you how to program with Python, using code examples taken directly from bioinformatics. In a short time, you'll be using sophisticated techniques and Python modules that are particularly effective for bioinformatics programming. Bioinformatics Programming Using Python is perfect for anyone involved with bioinformatics -- researchers, support staff, students, and software developers interested in writing bioinformatics applications. You'll find it useful whether you already use Python, write code in another language, or have no programming experience at all. It's an excellent self-instruction tool, as well as a handy reference when facing the challenges of real-life programming tasks. Become familiar with Python's fundamentals, including ways to develop simple applications Learn how to use Python modules for pattern matching, structured text processing, online data retrieval, and database access Discover generalized patterns that cover a large proportion of how Python code is used in bioinformatics Learn how to apply the principles and techniques of object-oriented programming Benefit from the "tips and traps" section in each chapter

Author : نجيب محفوظ
ISBN : 9789770930779
Genre : Fiction
File Size : 24. 93 MB
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ليالي ألف ليلة وليلة معاصرة... ومملكة شهريار مدائن معاني تضج في خيال نجيب محفوظ... وشهرزاد رمزاً ينسحب... يتسلل من الماضي كاسم ليكون شهرزادات وليكون شهريار شهريارات ولتأتي الحكاية حكاية كل زمان وكل مكان... تحدث بالقهر... بالتسلط والمعاناة.... ويقف نجيب محفوظ خلف سطوره... وبين ثنايا معانيه يحركها وكأنه الواقف خلف ستار مسرح الدمى... يحرك عرائسه... يبدل أثوابها... يزخرفها... يلونها بألف لون ولون... ليغدو القارئ المشاهد أسير عالمه ويعود بذاكرته إلى الوراء... ليدنو إلى ما يسفر عنه الحاضر

The Awakening And Other Short Stories Arabic Edition

Author : Kate Chopin
ISBN : 1537188313
Genre :
File Size : 87. 10 MB
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Author : هربرت جورج ويلز
ISBN :
Genre : Literary Collections
File Size : 57. 27 MB
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هذه الرواية هى أول رواية بارزة تعبر عن تلك الثورة الفكرية الشاملة، وهي قصة مُقتضبة، ممتعة في قراءتها، وتعلق في الذاكرة إلى الأبد. تدور أحداثها حول رجل إنجليزي ينحدر من أصول نبيلة يُدعى إدوارد برينديك، تسوقه الأقدار إلى جزيرة بالمحيط الهادئ لا يسكنها سوى عالم تشريح الحيوانات الحيَّة دكتور مورو (ومساعده مونتجومري)، بالإضافة إلى عدد من أنصاف البشر الذين استحدثهم مورو بالوسائل الجراحية وغيرها من التدخلات في الحياة الحيوانية. وبعد تجسيد الرواية في العديد من الأفلام، واقتباس كتاب آخرين لها، صار اسم الدكتور الآثم رمزًا لسادية مشرِّح الحيوانات الحية وللحيوانيَّة المبتكَرة.

Python For The Life Sciences

Author : Alexander Lancaster
ISBN : 1484245229
Genre : Computers
File Size : 48. 50 MB
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Written in a fun, accessible and engaging style, this book will introduce you to the Python language with fully worked examples of Python code drawn from all aspects of life sciences, including bioinformatics, structural biology, developmental biology, and evolutionary biology and ecology. Using familiar examples designed specifically for life scientists, you'll learn the basics of the language from the very first chapters and progress from there. You'll find out how to use Python to automate lab calculations, search for gene promoter sequences, rotate a molecular bond, build a cellular toggle switch, model animal coat pattern formation, grow a virtual plant, simulate a flu epidemic, or evolve populations. Python for the Life Sciences provides the tools, confidence and inspiration to start crafting your own Python solutions for the challenges you face in your research. If you are a life scientist interested in learning Python to jump-start your research, this book is for you. What You'll Learn Automate your routine lab calculations with Python Find important motifs in genome sequences Use object-oriented programming with Python to model the ‘flu Mine interaction network data for patterns Create simulations of biochemical switches Who This Book Is For Life and medical scientists with little or no programming experience, and undergraduates, graduate students, postdocs, and professors.

Information Industry Directory

Author :
ISBN : CORNELL:31924112295054
Genre : Data libraries
File Size : 33. 98 MB
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Matplotlib For Python Developers

Author : Aldrin Yim
ISBN : 9781788628136
Genre : Computers
File Size : 64. 66 MB
Format : PDF
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Leverage the power of Matplotlib to visualize and understand your data more effectively Key Features Perform effective data visualization with Matplotlib and get actionable insights from your data Design attractive graphs, charts, and 2D plots, and deploy them to the web Get the most out of Matplotlib in this practical guide with updated code and examples Book Description Python is a general-purpose programming language increasingly being used for data analysis and visualization. Matplotlib is a popular data visualization package in Python used to design effective plots and graphs. This is a practical, hands-on resource to help you visualize data with Python using the Matplotlib library. Matplotlib for Python Developers, Second Edition shows you how to create attractive graphs, charts, and plots using Matplotlib. You will also get a quick introduction to third-party packages, Seaborn, Pandas, Basemap, and Geopandas, and learn how to use them with Matplotlib. After that, you’ll embed and customize your plots in third-party tools such as GTK+3, Qt 5, and wxWidgets. You’ll also be able to tweak the look and feel of your visualization with the help of practical examples provided in this book. Further on, you’ll explore Matplotlib 2.1.x on the web, from a cloud-based platform using third-party packages such as Django. Finally, you will integrate interactive, real-time visualization techniques into your current workflow with the help of practical real-world examples. By the end of this book, you’ll be thoroughly comfortable with using the popular Python data visualization library Matplotlib 2.1.x and leveraging its power to build attractive, insightful, and powerful visualizations. What you will learn Create 2D and 3D static plots such as bar charts, heat maps, and scatter plots Get acquainted with GTK+3, Qt5, and wxWidgets to understand the UI backend of Matplotlib Develop advanced static plots with third-party packages such as Pandas, GeoPandas, and Seaborn Create interactive plots with real-time updates Develop web-based, Matplotlib-powered graph visualizations with third-party packages such as Django Write data visualization code that is readily expandable on the cloud platform Who this book is for This book is essentially for anyone who wants to create intuitive data visualizations using the Matplotlib library. If you’re a data scientist or analyst and wish to create attractive visualizations using Python, you’ll find this book useful. Some knowledge of Python programming is all you need to get started.

Numerical Computing With Python

Author : Pratap Dangeti
ISBN : 1789953634
Genre : Computers
File Size : 90. 35 MB
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Understand, explore, and effectively present data using the powerful data visualization techniques of Python Key Features Use the power of Pandas and Matplotlib to easily solve data mining issues Understand the basics of statistics to build powerful predictive data models Grasp data mining concepts with helpful use-cases and examples Book Description Data mining, or parsing the data to extract useful insights, is a niche skill that can transform your career as a data scientist Python is a flexible programming language that is equipped with a strong suite of libraries and toolkits, and gives you the perfect platform to sift through your data and mine the insights you seek. This Learning Path is designed to familiarize you with the Python libraries and the underlying statistics that you need to get comfortable with data mining. You will learn how to use Pandas, Python's popular library to analyze different kinds of data, and leverage the power of Matplotlib to generate appealing and impressive visualizations for the insights you have derived. You will also explore different machine learning techniques and statistics that enable you to build powerful predictive models. By the end of this Learning Path, you will have the perfect foundation to take your data mining skills to the next level and set yourself on the path to become a sought-after data science professional. This Learning Path includes content from the following Packt products: Statistics for Machine Learning by Pratap Dangeti Matplotlib 2.x By Example by Allen Yu, Claire Chung, Aldrin Yim Pandas Cookbook by Theodore Petrou What you will learn Understand the statistical fundamentals to build data models Split data into independent groups Apply aggregations and transformations to each group Create impressive data visualizations Prepare your data and design models Clean up data to ease data analysis and visualization Create insightful visualizations with Matplotlib and Seaborn Customize the model to suit your own predictive goals Who this book is for If you want to learn how to use the many libraries of Python to extract impactful information from your data and present it as engaging visuals, then this is the ideal Learning Path for you. Some basic knowledge of Python is enough to get started with this Learning Path.

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